STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF66263.1Protein of unknown function. (100 aa)    
Predicted Functional Partners:
SFF66292.1
Protein of unknown function.
 
     0.701
SFF66103.1
Hypothetical protein.
  
     0.681
SFF88305.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
  
     0.637
SFF91119.1
Hypothetical protein.
  
     0.583
SFF83810.1
MFS transporter, PPP family, 3-phenylpropionic acid transporter.
  
     0.564
SFF71304.1
Transglutaminase-like superfamily protein.
  
     0.559
SFF66023.1
Pyridoxamine 5'-phosphate oxidase.
  
     0.556
SFG52947.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
     0.532
SFG06359.1
Hypothetical protein.
  
     0.521
SFF68404.1
Cytochrome c551.
  
     0.517
Your Current Organism:
Planifilum fulgidum
NCBI taxonomy Id: 201973
Other names: ATCC BAA-970, DSM 44945, JCM 12508, P. fulgidum, Planifilum fulgidum Hatayama et al. 2005, Planifilum fulgidus, Thermoactinomyces sp. 500275, Thermoactinomyces sp. 700375, Thermoactinomyces sp. C0170, strain 500275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.