STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG13867.1Peptide/nickel transport system permease protein. (320 aa)    
Predicted Functional Partners:
SFG13841.1
Peptide/nickel transport system permease protein.
 
  0.966
SFG13891.1
Peptide/nickel transport system substrate-binding protein.
  0.939
SFG13938.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.884
SFF64772.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.863
SFF94094.1
Peptide/nickel transport system permease protein.
 
  0.856
SFF64750.1
Peptide/nickel transport system permease protein.
 
  0.855
SFG06864.1
Oligopeptide transport system permease protein.
 
  0.848
SFG22582.1
Peptide/nickel transport system permease protein.
 
  0.848
SFF88171.1
Dipeptide transport system permease protein.
 
  0.840
SFF94138.1
Peptide/nickel transport system substrate-binding protein.
  0.826
Your Current Organism:
Planifilum fulgidum
NCBI taxonomy Id: 201973
Other names: ATCC BAA-970, DSM 44945, JCM 12508, P. fulgidum, Planifilum fulgidum Hatayama et al. 2005, Planifilum fulgidus, Thermoactinomyces sp. 500275, Thermoactinomyces sp. 700375, Thermoactinomyces sp. C0170, strain 500275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.