STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG29470.1Acetyltransferase (GNAT) family protein. (245 aa)    
Predicted Functional Partners:
SFG29410.1
Cytosine permease.
 
     0.777
SFG28284.1
Hypothetical protein.
  
     0.650
SFG46911.1
Glutathionylspermidine synthase preATP-grasp.
  
     0.582
SFF69882.1
DNA-binding transcriptional regulator, ArsR family.
  
     0.472
SFG38968.1
Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.
  
     0.467
SFG28232.1
Transcriptional regulator, TetR family.
  
     0.452
SFG21641.1
Predicted arabinose efflux permease, MFS family.
  
     0.450
SFG46885.1
Putative membrane protein.
  
     0.443
SFG30487.1
Predicted arabinose efflux permease, MFS family.
  
     0.432
SFF84828.1
Helix-turn-helix domain-containing protein.
  
     0.429
Your Current Organism:
Planifilum fulgidum
NCBI taxonomy Id: 201973
Other names: ATCC BAA-970, DSM 44945, JCM 12508, P. fulgidum, Planifilum fulgidum Hatayama et al. 2005, Planifilum fulgidus, Thermoactinomyces sp. 500275, Thermoactinomyces sp. 700375, Thermoactinomyces sp. C0170, strain 500275
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.