STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_00180Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (348 aa)    
Predicted Functional Partners:
CR66_05735
S-ribosylhomocysteine lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.917
ubiA-2
UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.749
ubiA
UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.745
CR66_04765
Chlorohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.733
CR66_06230
Flagellar basal body rod protein FlgB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.721
CR66_05965
FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.675
CR66_04525
S-adenosylhomocysteine nucleosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.630
CR66_08230
Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.630
CR66_01300
Rod-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.611
CR66_08530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.604
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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