STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_02725Excinuclease ABC subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology. (597 aa)    
Predicted Functional Partners:
CR66_06775
The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.996
CR66_04495
UvrABC system subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.961
CR66_06820
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.809
CR66_02720
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
CR66_02730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
CR66_05835
DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.757
CR66_00125
DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.747
guaA
GMP synthase; Contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.740
ruvA
ATP-dependent DNA helicase RuvA; Plays an essential role in ATP-dependent branch migration of the Holliday junction; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.722
CR66_00720
NAD-dependent DNA ligase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.715
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.