STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_03115ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (180 aa)    
Predicted Functional Partners:
glyA
Serine hydroxymethyltransferase; Catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.816
CR66_03105
lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.796
CR66_03120
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
CR66_03125
Shikimate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
CR66_03100
Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.749
CR66_03085
glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
CR66_03090
Twitching motility protein pilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
CR66_03095
Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.723
CR66_03070
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
CR66_03075
L-seryl-tRNA selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.