Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CR66_03465Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
CR66_03460
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
CR66_03470
glutamylglutaminyl-tRNA ligase; GluRS2; in Helicobacter this enzyme was found to misacylate tRNA-Gln with glutamate which is further transamidated to glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.818
CR66_00640
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.595
CR66_00340
Cell division protein FtsZ; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.564
CR66_03475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.520
CR66_03480
Large-conductance mechanosensitive channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.512
CR66_00335
Cell division protein FtsA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.445
CR66_00320
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.412
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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