Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CR66_03495beta-ketoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (456 aa)    
Predicted Functional Partners:
CR66_03180
Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.957
CR66_03490
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.939
CR66_03165
Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.924
CR66_03395
Hydroxylamine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.900
CR66_05975
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
CR66_09300
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
CR66_08855
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.684
CR66_03500
Metallophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
CR66_03505
Phosphatidylserine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.554
CR66_03510
Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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