STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_04700DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology. (879 aa)    
Predicted Functional Partners:
CR66_08365
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
CR66_05755
Recombinase RecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
CR66_06415
DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.960
CR66_03730
Peptide methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.935
CR66_08975
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.889
CR66_03995
DNA topoisomerase I; Catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.876
CR66_08965
Ribonuclease H; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.849
CR66_07560
Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.816
CR66_02625
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.811
CR66_02100
Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.790
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.