STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_0489516S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
CR66_04880
6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.796
CR66_04885
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
CR66_04890
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
CR66_06535
Ribosomal protein L11 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.703
CR66_04905
16S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.690
CR66_08230
Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.646
CR66_02660
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.641
CR66_04910
RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.621
CR66_04900
50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.611
CR66_06635
Competence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.573
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.