STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_05830phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
CR66_07865
50S ribosomal protein L23; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.969
CR66_03435
methionyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.968
CR66_06710
50S ribosomal protein L13; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.962
CR66_07930
50S ribosomal protein L6; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.960
CR66_07935
50S ribosomal protein L18; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.959
rpsN
30S ribosomal protein S14; Located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.955
CR66_07870
50S ribosomal protein L2; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.951
CR66_07880
50S ribosomal protein L22; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.949
CR66_07945
50S ribosomal protein L15; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.949
CR66_07915
50S ribosomal protein L5; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.947
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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