STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_07545ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology. (439 aa)    
Predicted Functional Partners:
CR66_06705
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.932
CR66_07550
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.795
CR66_08365
DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.728
CR66_08975
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.653
CR66_09015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.653
CR66_07055
DNA helicase; Unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.636
truB
tRNA pseudouridine synthase B; Catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.635
CR66_07540
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.592
CR66_03995
DNA topoisomerase I; Catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.579
CR66_04700
DNA polymerase I; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.440
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.