STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CR66_07720Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)    
Predicted Functional Partners:
CR66_07725
Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
CR66_06765
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
CR66_07715
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.535
CR66_07695
Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
CR66_07700
Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
frr
Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
CR66_07710
Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.528
CR66_07685
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
CR66_07690
Thiamine-phosphate pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.424
CR66_09145
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.415
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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