Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
CR66_08045Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (302 aa)    
Predicted Functional Partners:
CR66_08040
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
CR66_08035
Iron deficiency-induced protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.980
CR66_05690
Molybdenum ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.660
CR66_08030
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.566
CR66_00760
Cell division protein FtsY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.521
CR66_08050
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.504
CR66_07940
30S ribosomal protein S5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.467
CR66_08015
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
CR66_08020
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
CR66_08025
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.414
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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