Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CR66_08075PAS sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (166 aa)    
Predicted Functional Partners:
CR66_08080
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.978
CR66_07335
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.803
CR66_02710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.790
CR66_05190
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.601
CR66_07975
Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.586
CR66_09225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 
   0.586
CR66_05195
Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.562
CR66_08530
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.526
CR66_08945
Transducer; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.521
CR66_03475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.491
Your Current Organism:
Campylobacter mucosalis
NCBI taxonomy Id: 202
Other names: ATCC 43264, C. mucosalis, CCUG 6822, CIP 103750, Campylobacter sputorum mucosalis, Campylobacter sputorum subsp. mucosalis, DSM 21682, NCTC 11000, strain FS253/72
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