Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIS61393.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (77 aa)    
Predicted Functional Partners:
AIS61392.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.626
AIS61394.1
ROK family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.599
AIS61395.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.543
AIS63961.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.526
araA
Arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.487
AIS62886.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.487
AIS61288.1
Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.469
AIS62042.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.467
AIS61438.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.403
AIS61850.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.403
Your Current Organism:
Listeria ivanovii
NCBI taxonomy Id: 202752
Other names: ATCC 49954, CCUG 36672, CIP 103466, CLIP 12229, DSM 12491, L. ivanovii subsp. londoniensis, Listeria ivanovii subsp. londoniensis, NCTC 12701
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.