Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AIS62013.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (206 aa)    
Predicted Functional Partners:
AIS62011.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.962
AIS62010.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.924
AIS62012.1
Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.894
AIS61535.1
Ring-cleaving dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.831
AIS62206.1
Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.586
pyrK
Dihydroorotate dehydrogenase; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
 
  0.520
AIS61391.1
NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.515
AIS63992.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.497
AIS62008.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
AIS62009.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.489
Your Current Organism:
Listeria ivanovii
NCBI taxonomy Id: 202752
Other names: ATCC 49954, CCUG 36672, CIP 103466, CLIP 12229, DSM 12491, L. ivanovii subsp. londoniensis, Listeria ivanovii subsp. londoniensis, NCTC 12701
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