STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIS62250.1Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (157 aa)    
Predicted Functional Partners:
AIS64039.1
AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.867
AIS62251.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.587
AIS62249.1
Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.582
AIS62186.1
Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.550
sigA
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
  
   0.494
AIS61701.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.461
AIS62810.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.461
AIS63811.1
Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.461
AIS62248.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.453
AIS61324.1
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.445
Your Current Organism:
Listeria ivanovii
NCBI taxonomy Id: 202752
Other names: ATCC 49954, CCUG 36672, CIP 103466, CLIP 12229, DSM 12491, L. ivanovii subsp. londoniensis, Listeria ivanovii subsp. londoniensis, NCTC 12701
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.