Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AIS64016.1Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. (422 aa)    
Predicted Functional Partners:
AIS62652.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.973
AIS62653.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
AIS62293.1
Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.
 
 
  0.593
AIS62651.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.541
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
  0.539
AIS61453.1
Glycosyl hydrolase family 31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
   
  0.524
AIS61454.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
   
  0.524
AIS63587.1
Glycosyl hydrolase family 31; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.524
AIS63589.1
Glycosyl hydrolase family 31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
   
  0.524
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.521
Your Current Organism:
Listeria ivanovii
NCBI taxonomy Id: 202752
Other names: ATCC 49954, CCUG 36672, CIP 103466, CLIP 12229, DSM 12491, L. ivanovii subsp. londoniensis, Listeria ivanovii subsp. londoniensis, NCTC 12701
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