Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AIS62869.1ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)    
Predicted Functional Partners:
AIS62870.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.972
AIS62009.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.733
AIS63453.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.634
AIS62868.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.605
AIS61822.1
Tetronasin resistance transmembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.577
AIS61531.1
ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.561
AIS61537.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.536
AIS62178.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.535
AIS62105.1
Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.532
AIS63472.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.532
Your Current Organism:
Listeria ivanovii
NCBI taxonomy Id: 202752
Other names: ATCC 49954, CCUG 36672, CIP 103466, CLIP 12229, DSM 12491, L. ivanovii subsp. londoniensis, Listeria ivanovii subsp. londoniensis, NCTC 12701
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