Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIS63830.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (115 aa)    
Predicted Functional Partners:
AIS64051.1
Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA polymerase type-Y family.
 
     0.806
AIS63829.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AIS63358.1
CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.627
AIS62563.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.519
AIS63831.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
       0.519
AIS63832.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.519
AIS62564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.515
AIS63833.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.513
AIS64050.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
AIS63826.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.468
Your Current Organism:
Listeria ivanovii
NCBI taxonomy Id: 202752
Other names: ATCC 49954, CCUG 36672, CIP 103466, CLIP 12229, DSM 12491, L. ivanovii subsp. londoniensis, Listeria ivanovii subsp. londoniensis, NCTC 12701
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.