Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
K9EDP6_9ACTO | K9EFG5_9ACTO | GCA_001457435_01427 | GCA_001457435_00131 | Unannotated protein. | Unannotated protein. | 0.440 |
K9EDP6_9ACTO | pheT | GCA_001457435_01427 | GCA_001457435_00486 | Unannotated protein. | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.436 |
K9EDP6_9ACTO | trmB | GCA_001457435_01427 | GCA_001457435_00606 | Unannotated protein. | Unannotated protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.566 |
K9EDP6_9ACTO | uvrC | GCA_001457435_01427 | GCA_001457435_00565 | Unannotated protein. | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.427 |
K9EFG5_9ACTO | K9EDP6_9ACTO | GCA_001457435_00131 | GCA_001457435_01427 | Unannotated protein. | Unannotated protein. | 0.440 |
K9EFG5_9ACTO | uvrC | GCA_001457435_00131 | GCA_001457435_00565 | Unannotated protein. | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.436 |
pheT | K9EDP6_9ACTO | GCA_001457435_00486 | GCA_001457435_01427 | Unannotated protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Unannotated protein. | 0.436 |
trmB | K9EDP6_9ACTO | GCA_001457435_00606 | GCA_001457435_01427 | Unannotated protein; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Unannotated protein. | 0.566 |
uvrC | K9EDP6_9ACTO | GCA_001457435_00565 | GCA_001457435_01427 | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | Unannotated protein. | 0.427 |
uvrC | K9EFG5_9ACTO | GCA_001457435_00565 | GCA_001457435_00131 | Unannotated protein; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | Unannotated protein. | 0.436 |