STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JA9_001129Putative membrane protein. (476 aa)    
Predicted Functional Partners:
JA9_000381
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.727
JA9_001754
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.602
JA9_001756
DNA-directed RNA polymerase II subunit rpb7.
    
  0.602
JA9_001815
DNA-directed RNA polymerases I II and III subunit RPABC1.
    
  0.602
JA9_001146
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.602
JA9_003052
Putative 3-hydroxyisobutyrate dehydrogenase mitochondrial.
    
 0.569
JA9_000330
PWWP domain-containing protein.
    
 0.569
JA9_003828
DNA-directed RNA polymerase II subunit RPB3.
    
  0.568
JA9_003501
DNA-directed RNA polymerase II subunit RPB11.
    
  0.555
JA9_001567
Cleavage and polyadenylation specificity factor subunit 2.
    
  0.537
Your Current Organism:
Meyerozyma sp. JA9
NCBI taxonomy Id: 2028340
Other names: M. sp. JA9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.