STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JA9_004241G-patch domain-containing protein. (672 aa)    
Predicted Functional Partners:
JA9_001288
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.
   
 0.994
JA9_002979
Uncharacterized protein.
    
   0.980
JA9_001570
Pre-mRNA-splicing factor CLF1.
   
   0.980
JA9_002346
Pre-mRNA-splicing factor cwf10.
   
 
 0.955
JA9_001810
Pre-mRNA-processing factor.
   
 0.949
JA9_000075
Pre-mRNA-splicing factor 8.
    
 
 0.941
JA9_003565
Pre-mRNA-splicing factor.
    
  0.924
JA9_002404
U2 small nuclear ribonucleoprotein A.
    
 
 0.920
JA9_003763
Pre-mRNA-splicing factor SYF1.
   
 
 0.907
JA9_003359
Small nuclear ribonucleoprotein-associated protein B.
    
   0.901
Your Current Organism:
Meyerozyma sp. JA9
NCBI taxonomy Id: 2028340
Other names: M. sp. JA9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.