Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACEE_03445Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)    
Predicted Functional Partners:
ACEE_11395
RNA polymerase subunit sigma-32; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.758
ACEE_03080
Mor transcription activator family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.641
tgt
Queuine tRNA-ribosyltransferase; Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.615
ACEE_02960
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.603
ACEE_05070
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.582
ACEE_02935
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
ACEE_02945
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.540
ACEE_02950
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.527
ACEE_01060
Lsg locus protein 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.503
ACEE_07965
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.483
Your Current Organism:
Actinobacillus equuli
NCBI taxonomy Id: 202947
Other names: A. equuli subsp. equuli, Actinobacillus equuli subsp. equuli
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