Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACEE_06165 | csd | ACEE_06165 | ACEE_06155 | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.584 |
ACEE_06165 | nuc | ACEE_06165 | ACEE_06160 | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.591 |
ACEE_06165 | pfkA_1 | ACEE_06165 | ACEE_06150 | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.402 |
ACEE_06165 | putP_2 | ACEE_06165 | ACEE_06805 | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Proline:sodium symporter PutP; Involved in the sodium dependent uptake of proline; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.416 |
csd | ACEE_06165 | ACEE_06155 | ACEE_06165 | Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.584 |
csd | nuc | ACEE_06155 | ACEE_06160 | Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
csd | pfkA_1 | ACEE_06155 | ACEE_06150 | Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.518 |
nuc | ACEE_06165 | ACEE_06160 | ACEE_06165 | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.591 |
nuc | csd | ACEE_06160 | ACEE_06155 | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
nuc | pfkA_1 | ACEE_06160 | ACEE_06150 | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.516 |
pfkA_1 | ACEE_06165 | ACEE_06150 | ACEE_06165 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
pfkA_1 | csd | ACEE_06150 | ACEE_06155 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.518 |
pfkA_1 | nuc | ACEE_06150 | ACEE_06160 | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |
putP_2 | ACEE_06165 | ACEE_06805 | ACEE_06165 | Proline:sodium symporter PutP; Involved in the sodium dependent uptake of proline; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.416 |