Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EXE25_03475 | EXE25_05740 | GCA_001485025_00306 | GCA_001485025_01882 | Unannotated protein. | Unannotated protein. | 0.923 |
EXE25_03475 | gmk | GCA_001485025_00306 | GCA_001485025_01287 | Unannotated protein. | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | 0.951 |
EXE25_03475 | guaA | GCA_001485025_00306 | GCA_001485025_02529 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.990 |
EXE25_03475 | guaB | GCA_001485025_00306 | GCA_001485025_02030 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.717 |
EXE25_03475 | guaD | GCA_001485025_00306 | GCA_001485025_03104 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. | 0.918 |
EXE25_03475 | hpt | GCA_001485025_00306 | GCA_001485025_03105 | Unannotated protein. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.931 |
EXE25_03475 | ppnP | GCA_001485025_00306 | GCA_001485025_01358 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.955 |
EXE25_03475 | surE | GCA_001485025_00306 | GCA_001485025_01481 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.917 |
EXE25_03475 | xpt | GCA_001485025_00306 | GCA_001485025_01148 | Unannotated protein. | Unannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.916 |
EXE25_05740 | EXE25_03475 | GCA_001485025_01882 | GCA_001485025_00306 | Unannotated protein. | Unannotated protein. | 0.923 |
EXE25_05740 | gmk | GCA_001485025_01882 | GCA_001485025_01287 | Unannotated protein. | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | 0.919 |
EXE25_05740 | guaA | GCA_001485025_01882 | GCA_001485025_02529 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.916 |
EXE25_05740 | guaB | GCA_001485025_01882 | GCA_001485025_02030 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.977 |
EXE25_05740 | hpt | GCA_001485025_01882 | GCA_001485025_03105 | Unannotated protein. | Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.920 |
EXE25_05740 | rdgB | GCA_001485025_01882 | GCA_001485025_00959 | Unannotated protein. | Unannotated protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. | 0.915 |
EXE25_05740 | surE | GCA_001485025_01882 | GCA_001485025_01481 | Unannotated protein. | Unannotated protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.919 |
EXE25_05740 | xpt | GCA_001485025_01882 | GCA_001485025_01148 | Unannotated protein. | Unannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.923 |
gmk | EXE25_03475 | GCA_001485025_01287 | GCA_001485025_00306 | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | Unannotated protein. | 0.951 |
gmk | EXE25_05740 | GCA_001485025_01287 | GCA_001485025_01882 | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | Unannotated protein. | 0.919 |
gmk | guaA | GCA_001485025_01287 | GCA_001485025_02529 | Unannotated protein; Essential for recycling GMP and indirectly, cGMP. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.980 |
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