Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCA_001485025_01296 | GCA_001485025_01297 | GCA_001485025_01296 | GCA_001485025_01297 | Unannotated protein. | Unannotated protein. | 0.576 |
GCA_001485025_01296 | guaA | GCA_001485025_01296 | GCA_001485025_02529 | Unannotated protein. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.577 |
GCA_001485025_01296 | macB | GCA_001485025_01296 | GCA_001485025_00919 | Unannotated protein. | Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.400 |
GCA_001485025_01296 | nagZ | GCA_001485025_01296 | GCA_001485025_00936 | Unannotated protein. | Unannotated protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | 0.462 |
GCA_001485025_01297 | GCA_001485025_01296 | GCA_001485025_01297 | GCA_001485025_01296 | Unannotated protein. | Unannotated protein. | 0.576 |
guaA | GCA_001485025_01296 | GCA_001485025_02529 | GCA_001485025_01296 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein. | 0.577 |
guaA | macB | GCA_001485025_02529 | GCA_001485025_00919 | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | 0.427 |
macB | GCA_001485025_01296 | GCA_001485025_00919 | GCA_001485025_01296 | Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Unannotated protein. | 0.400 |
macB | guaA | GCA_001485025_00919 | GCA_001485025_02529 | Unannotated protein; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. | Unannotated protein; Catalyzes the synthesis of GMP from XMP. | 0.427 |
nagZ | GCA_001485025_01296 | GCA_001485025_00936 | GCA_001485025_01296 | Unannotated protein; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily. | Unannotated protein. | 0.462 |