Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EXE25_02450 | carA | GCA_001485025_01302 | GCA_001485025_02281 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.914 |
EXE25_02450 | carB | GCA_001485025_01302 | GCA_001485025_02282 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.918 |
EXE25_02450 | glmS | GCA_001485025_01302 | GCA_001485025_02557 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.920 |
EXE25_02450 | glnA | GCA_001485025_01302 | GCA_001485025_02234 | Unannotated protein. | Unannotated protein. | 0.940 |
EXE25_02450 | gltB | GCA_001485025_01302 | GCA_001485025_01303 | Unannotated protein. | Unannotated protein. | 0.999 |
EXE25_02450 | purF | GCA_001485025_01302 | GCA_001485025_01811 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.915 |
EXE25_08410 | glmS | GCA_001485025_02558 | GCA_001485025_02557 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.855 |
EXE25_08410 | glmU | GCA_001485025_02558 | GCA_001485025_02556 | Unannotated protein. | Unannotated protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.809 |
GCA_001485025_02560 | glmM | GCA_001485025_02560 | GCA_001485025_02031 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.556 |
GCA_001485025_02560 | glmS | GCA_001485025_02560 | GCA_001485025_02557 | Unannotated protein. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.967 |
GCA_001485025_02560 | purF | GCA_001485025_02560 | GCA_001485025_01811 | Unannotated protein. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.491 |
carA | EXE25_02450 | GCA_001485025_02281 | GCA_001485025_01302 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.914 |
carA | carB | GCA_001485025_02281 | GCA_001485025_02282 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the CarB family. | 0.999 |
carA | glmS | GCA_001485025_02281 | GCA_001485025_02557 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.922 |
carA | glnA | GCA_001485025_02281 | GCA_001485025_02234 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.940 |
carA | gltB | GCA_001485025_02281 | GCA_001485025_01303 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.951 |
carA | purF | GCA_001485025_02281 | GCA_001485025_01811 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.967 |
carB | EXE25_02450 | GCA_001485025_02282 | GCA_001485025_01302 | Unannotated protein; Belongs to the CarB family. | Unannotated protein. | 0.918 |
carB | carA | GCA_001485025_02282 | GCA_001485025_02281 | Unannotated protein; Belongs to the CarB family. | Unannotated protein; Belongs to the CarA family. | 0.999 |
carB | glmS | GCA_001485025_02282 | GCA_001485025_02557 | Unannotated protein; Belongs to the CarB family. | Unannotated protein; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.944 |
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