STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F960_01375Unannotated protein. (225 aa)    
Predicted Functional Partners:
F960_01374
Unannotated protein.
 
     0.875
F960_01373
Unannotated protein.
 
     0.828
F960_01372
Unannotated protein.
 
     0.822
F960_01376
Unannotated protein.
       0.773
F960_01228
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.630
F960_01911
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.630
F960_03781
Unannotated protein.
  
 
 0.630
F960_03580
Unannotated protein; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.630
F960_01377
Unannotated protein.
 
     0.501
F960_01371
Unannotated protein.
       0.475
Your Current Organism:
Acinetobacter gerneri
NCBI taxonomy Id: 202952
Other names: A. gerneri, Acinetobacter gerneri Carr et al. 2003, CIP 107464, DSM 14967, strain 9A01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.