STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F960_03881Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (274 aa)    
Predicted Functional Partners:
psd
Unannotated protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
 0.975
F960_03714
Unannotated protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.942
F960_02899
Unannotated protein; Belongs to the CDS family.
    
 0.934
F960_02558
Unannotated protein.
  
 
 0.914
F960_02553
Unannotated protein.
    
  0.911
F960_04231
Unannotated protein.
    
  0.909
F960_00754
Unannotated protein.
    
  0.905
rlmJ
Unannotated protein; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.790
F960_03880
Unannotated protein.
       0.778
F960_03883
Unannotated protein.
       0.683
Your Current Organism:
Acinetobacter gerneri
NCBI taxonomy Id: 202952
Other names: A. gerneri, Acinetobacter gerneri Carr et al. 2003, CIP 107464, DSM 14967, strain 9A01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.