STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F960_02904Unannotated protein. (369 aa)    
Predicted Functional Partners:
ntrC
Unannotated protein; Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.
 0.999
F960_03822
Unannotated protein; Belongs to the P(II) protein family.
  
 0.969
F960_03807
Unannotated protein.
 0.906
F960_04155
Unannotated protein.
 
 
 0.903
F960_00437
Unannotated protein.
 
 
 0.861
F960_00848
Unannotated protein.
   
 0.781
F960_02402
Unannotated protein.
   
 0.781
F960_02978
Unannotated protein.
 
 0.761
F960_01977
Unannotated protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
 
  
 0.740
F960_04220
Unannotated protein.
  
 
 0.718
Your Current Organism:
Acinetobacter gerneri
NCBI taxonomy Id: 202952
Other names: A. gerneri, Acinetobacter gerneri Carr et al. 2003, CIP 107464, DSM 14967, strain 9A01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.