STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F960_02946Unannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (369 aa)    
Predicted Functional Partners:
F960_02947
Unannotated protein; Belongs to the muconolactone Delta-isomerase family.
 
 
 0.999
F960_02948
Unannotated protein.
 
 
 0.990
F960_02985
Unannotated protein.
 
 
 0.982
F960_02134
Unannotated protein.
 
 
 0.920
F960_02618
Unannotated protein.
   
 
 0.907
F960_02949
Unannotated protein.
 
  
 0.902
F960_02952
Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
  
 0.895
F960_02950
Unannotated protein.
 
  
 0.866
F960_02951
Unannotated protein.
 
  
 0.858
F960_02759
Unannotated protein.
 
  
 0.767
Your Current Organism:
Acinetobacter gerneri
NCBI taxonomy Id: 202952
Other names: A. gerneri, Acinetobacter gerneri Carr et al. 2003, CIP 107464, DSM 14967, strain 9A01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.