STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F960_02237Unannotated protein; Belongs to the peptidase M24B family. (448 aa)    
Predicted Functional Partners:
F960_02239
Unannotated protein.
 
  
 0.871
F960_02238
Unannotated protein.
  
  
 0.846
F960_02236
Unannotated protein; Belongs to the UPF0149 family.
 
   
 0.722
F960_02234
Unannotated protein.
     
 0.661
F960_02235
Unannotated protein.
       0.626
guaB
Unannotated protein; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.608
F960_02240
Unannotated protein.
       0.539
nudJ
Unannotated protein; Belongs to the Nudix hydrolase family. NudJ subfamily.
 
   
 0.506
metG
Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
 
 
 0.494
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
 
  0.444
Your Current Organism:
Acinetobacter gerneri
NCBI taxonomy Id: 202952
Other names: A. gerneri, Acinetobacter gerneri Carr et al. 2003, CIP 107464, DSM 14967, strain 9A01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.