Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F960_00474 | F960_00550 | GCA_000747725_03954 | GCA_000747725_03878 | Unannotated protein. | Unannotated protein. | 0.613 |
F960_00474 | F960_04155 | GCA_000747725_03954 | GCA_000747725_01818 | Unannotated protein. | Unannotated protein. | 0.441 |
F960_00474 | atpE | GCA_000747725_03954 | GCA_000747725_02888 | Unannotated protein. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.693 |
F960_00546 | F960_00547 | GCA_000747725_03882 | GCA_000747725_03881 | Unannotated protein. | Unannotated protein. | 0.960 |
F960_00546 | F960_00548 | GCA_000747725_03882 | GCA_000747725_03880 | Unannotated protein. | Unannotated protein; Belongs to the D-glutamate cyclase family. | 0.783 |
F960_00546 | F960_00550 | GCA_000747725_03882 | GCA_000747725_03878 | Unannotated protein. | Unannotated protein. | 0.736 |
F960_00546 | pxpA | GCA_000747725_03882 | GCA_000747725_03879 | Unannotated protein. | Unannotated protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.749 |
F960_00547 | F960_00546 | GCA_000747725_03881 | GCA_000747725_03882 | Unannotated protein. | Unannotated protein. | 0.960 |
F960_00547 | F960_00548 | GCA_000747725_03881 | GCA_000747725_03880 | Unannotated protein. | Unannotated protein; Belongs to the D-glutamate cyclase family. | 0.996 |
F960_00547 | F960_00550 | GCA_000747725_03881 | GCA_000747725_03878 | Unannotated protein. | Unannotated protein. | 0.975 |
F960_00547 | F960_04155 | GCA_000747725_03881 | GCA_000747725_01818 | Unannotated protein. | Unannotated protein. | 0.559 |
F960_00547 | pxpA | GCA_000747725_03881 | GCA_000747725_03879 | Unannotated protein. | Unannotated protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.999 |
F960_00548 | F960_00546 | GCA_000747725_03880 | GCA_000747725_03882 | Unannotated protein; Belongs to the D-glutamate cyclase family. | Unannotated protein. | 0.783 |
F960_00548 | F960_00547 | GCA_000747725_03880 | GCA_000747725_03881 | Unannotated protein; Belongs to the D-glutamate cyclase family. | Unannotated protein. | 0.996 |
F960_00548 | F960_00550 | GCA_000747725_03880 | GCA_000747725_03878 | Unannotated protein; Belongs to the D-glutamate cyclase family. | Unannotated protein. | 0.954 |
F960_00548 | F960_00551 | GCA_000747725_03880 | GCA_000747725_03877 | Unannotated protein; Belongs to the D-glutamate cyclase family. | Unannotated protein; Belongs to the LysR transcriptional regulatory family. | 0.527 |
F960_00548 | pxpA | GCA_000747725_03880 | GCA_000747725_03879 | Unannotated protein; Belongs to the D-glutamate cyclase family. | Unannotated protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.963 |
F960_00550 | F960_00474 | GCA_000747725_03878 | GCA_000747725_03954 | Unannotated protein. | Unannotated protein. | 0.613 |
F960_00550 | F960_00546 | GCA_000747725_03878 | GCA_000747725_03882 | Unannotated protein. | Unannotated protein. | 0.736 |
F960_00550 | F960_00547 | GCA_000747725_03878 | GCA_000747725_03881 | Unannotated protein. | Unannotated protein. | 0.975 |
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