Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F960_00513 | F960_00514 | GCA_000747725_03915 | GCA_000747725_03914 | Unannotated protein. | Unannotated protein. | 0.461 |
F960_00514 | F960_00513 | GCA_000747725_03914 | GCA_000747725_03915 | Unannotated protein. | Unannotated protein. | 0.461 |
F960_00514 | F960_00515 | GCA_000747725_03914 | GCA_000747725_03913 | Unannotated protein. | Unannotated protein. | 0.614 |
F960_00514 | F960_02970 | GCA_000747725_03914 | GCA_000747725_01811 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.431 |
F960_00514 | F960_03401 | GCA_000747725_03914 | GCA_000747725_03583 | Unannotated protein. | Unannotated protein. | 0.562 |
F960_00514 | F960_04069 | GCA_000747725_03914 | GCA_000747725_03296 | Unannotated protein. | Unannotated protein. | 0.414 |
F960_00514 | cysG | GCA_000747725_03914 | GCA_000747725_03017 | Unannotated protein. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.680 |
F960_00515 | F960_00514 | GCA_000747725_03913 | GCA_000747725_03914 | Unannotated protein. | Unannotated protein. | 0.614 |
F960_02970 | F960_00514 | GCA_000747725_01811 | GCA_000747725_03914 | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.431 |
F960_02970 | F960_03401 | GCA_000747725_01811 | GCA_000747725_03583 | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.440 |
F960_02970 | F960_04069 | GCA_000747725_01811 | GCA_000747725_03296 | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Unannotated protein. | 0.943 |
F960_03401 | F960_00514 | GCA_000747725_03583 | GCA_000747725_03914 | Unannotated protein. | Unannotated protein. | 0.562 |
F960_03401 | F960_02970 | GCA_000747725_03583 | GCA_000747725_01811 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.440 |
F960_03401 | cysG | GCA_000747725_03583 | GCA_000747725_03017 | Unannotated protein. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.652 |
F960_04069 | F960_00514 | GCA_000747725_03296 | GCA_000747725_03914 | Unannotated protein. | Unannotated protein. | 0.414 |
F960_04069 | F960_02970 | GCA_000747725_03296 | GCA_000747725_01811 | Unannotated protein. | Unannotated protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.943 |
F960_04069 | cysG | GCA_000747725_03296 | GCA_000747725_03017 | Unannotated protein. | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | 0.506 |
cysG | F960_00514 | GCA_000747725_03017 | GCA_000747725_03914 | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Unannotated protein. | 0.680 |
cysG | F960_03401 | GCA_000747725_03017 | GCA_000747725_03583 | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Unannotated protein. | 0.652 |
cysG | F960_04069 | GCA_000747725_03017 | GCA_000747725_03296 | Unannotated protein; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family. | Unannotated protein. | 0.506 |