STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FM020_11845Unannotated protein. (203 aa)    
Predicted Functional Partners:
GCA_000760555_02466
Unannotated protein.
  
    0.780
FM020_12175
Unannotated protein.
  
    0.779
GCA_000760555_02981
Unannotated protein.
  
    0.779
GCA_000760555_02622
Unannotated protein.
  
    0.770
FM020_11850
Unannotated protein.
       0.727
FM020_05655
Unannotated protein.
  
     0.703
GCA_000760555_03009
Unannotated protein.
  
     0.685
FM020_11855
Unannotated protein; Belongs to the UPF0176 family.
       0.496
FM020_15255
Unannotated protein.
 
   
0.426
Your Current Organism:
Acinetobacter tandoii
NCBI taxonomy Id: 202954
Other names: A. tandoii, Acinetobacter sp. RTE1.4, Acinetobacter tandoii Carr et al. 2003, CIP 107469, DSM 14970, strain 4N13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.