STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FM020_12335Unannotated protein. (552 aa)    
Predicted Functional Partners:
F4W09_05980
Unannotated protein.
 
  0.996
FM020_00050
Unannotated protein.
 
0.913
FM020_13255
Unannotated protein.
  0.900
FM020_02020
Unannotated protein.
 
0.878
FM020_12085
Unannotated protein.
 
  0.853
GCA_000760555_00511
Unannotated protein.
 
  0.846
phoB
Unannotated protein.
  
  0.844
ompR
Unannotated protein.
  
  0.841
FM020_03085
Unannotated protein.
  
  0.834
FM020_10515
Unannotated protein.
 
  0.827
Your Current Organism:
Acinetobacter tandoii
NCBI taxonomy Id: 202954
Other names: A. tandoii, Acinetobacter sp. RTE1.4, Acinetobacter tandoii Carr et al. 2003, CIP 107469, DSM 14970, strain 4N13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.