STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FM020_13845Unannotated protein. (84 aa)    
Predicted Functional Partners:
FM020_13850
Unannotated protein.
    
  0.762
metH
Unannotated protein; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.654
rppH
Unannotated protein; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
    
  0.645
GCA_000760555_02999
Unannotated protein.
       0.588
metG
Unannotated protein; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
     
 0.551
ptsP
Unannotated protein; Belongs to the PEP-utilizing enzyme family.
       0.450
FM020_12075
Unannotated protein.
  
     0.439
FM020_05130
Unannotated protein.
  
     0.412
FM020_16425
Unannotated protein.
  
     0.400
Your Current Organism:
Acinetobacter tandoii
NCBI taxonomy Id: 202954
Other names: A. tandoii, Acinetobacter sp. RTE1.4, Acinetobacter tandoii Carr et al. 2003, CIP 107469, DSM 14970, strain 4N13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.