Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FM020_00985 | FM020_00990 | GCA_000760555_03600 | GCA_000760555_03599 | Unannotated protein. | Unannotated protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | 0.634 |
FM020_00985 | FM020_07805 | GCA_000760555_03600 | GCA_000760555_00440 | Unannotated protein. | Unannotated protein. | 0.431 |
FM020_00985 | fadB | GCA_000760555_03600 | GCA_000760555_03136 | Unannotated protein. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.654 |
FM020_00985 | plsB-2 | GCA_000760555_03600 | GCA_000760555_03601 | Unannotated protein. | Unannotated protein; Belongs to the GPAT/DAPAT family. | 0.639 |
FM020_00990 | FM020_00985 | GCA_000760555_03599 | GCA_000760555_03600 | Unannotated protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family. | Unannotated protein. | 0.634 |
FM020_07805 | FM020_00985 | GCA_000760555_00440 | GCA_000760555_03600 | Unannotated protein. | Unannotated protein. | 0.431 |
FM020_07805 | fadB | GCA_000760555_00440 | GCA_000760555_03136 | Unannotated protein. | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.974 |
fadB | FM020_00985 | GCA_000760555_03136 | GCA_000760555_03600 | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Unannotated protein. | 0.654 |
fadB | FM020_07805 | GCA_000760555_03136 | GCA_000760555_00440 | Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | Unannotated protein. | 0.974 |
plsB-2 | FM020_00985 | GCA_000760555_03601 | GCA_000760555_03600 | Unannotated protein; Belongs to the GPAT/DAPAT family. | Unannotated protein. | 0.639 |