STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F990_01560Unannotated protein. (559 aa)    
Predicted Functional Partners:
F990_00835
Unannotated protein.
  
 
  0.949
F990_02969
Unannotated protein.
  
 
  0.947
F990_00836
Unannotated protein.
  
 
  0.947
F990_03332
Unannotated protein.
   
 
 0.944
F990_02146
Unannotated protein.
   
 
  0.934
F990_02036
Unannotated protein.
 
 
 
  0.934
F990_01141
Unannotated protein.
   
 
  0.934
F990_01140
Unannotated protein.
   
 
  0.930
F990_02004
Unannotated protein.
 
 
  0.921
F990_01380
Unannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.848
Your Current Organism:
Acinetobacter tjernbergiae
NCBI taxonomy Id: 202955
Other names: A. tjernbergiae, Acinetobacter tjernbergiae Carr et al. 2003, CIP 107465, DSM 14971, strain 7N16
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