Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F990_00927 | purA | GCA_000759995_03203 | GCA_000759995_02181 | Unannotated protein. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.931 |
F990_00927 | pyrB | GCA_000759995_03203 | GCA_000759995_01227 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.936 |
F990_01060 | F990_01163 | GCA_000759995_01226 | GCA_000759995_01012 | Unannotated protein. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.694 |
F990_01060 | carA | GCA_000759995_01226 | GCA_000759995_03402 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.997 |
F990_01060 | carB | GCA_000759995_01226 | GCA_000759995_03403 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.997 |
F990_01060 | pyrB | GCA_000759995_01226 | GCA_000759995_01227 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
F990_01060 | pyrC | GCA_000759995_01226 | GCA_000759995_01749 | Unannotated protein. | Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate. | 0.938 |
F990_01060 | pyrD | GCA_000759995_01226 | GCA_000759995_02072 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.996 |
F990_01060 | pyrE | GCA_000759995_01226 | GCA_000759995_01417 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.957 |
F990_01060 | pyrF | GCA_000759995_01226 | GCA_000759995_00913 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.958 |
F990_01163 | F990_01060 | GCA_000759995_01012 | GCA_000759995_01226 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein. | 0.694 |
F990_01163 | carA | GCA_000759995_01012 | GCA_000759995_03402 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Belongs to the CarA family. | 0.995 |
F990_01163 | carB | GCA_000759995_01012 | GCA_000759995_03403 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Belongs to the CarB family. | 0.996 |
F990_01163 | pyrB | GCA_000759995_01012 | GCA_000759995_01227 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.946 |
F990_01163 | pyrD | GCA_000759995_01012 | GCA_000759995_02072 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.418 |
carA | F990_01060 | GCA_000759995_03402 | GCA_000759995_01226 | Unannotated protein; Belongs to the CarA family. | Unannotated protein. | 0.997 |
carA | F990_01163 | GCA_000759995_03402 | GCA_000759995_01012 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.995 |
carA | carB | GCA_000759995_03402 | GCA_000759995_03403 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the CarB family. | 0.999 |
carA | purA | GCA_000759995_03402 | GCA_000759995_02181 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.561 |
carA | pyrB | GCA_000759995_03402 | GCA_000759995_01227 | Unannotated protein; Belongs to the CarA family. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
page 1 of 4