Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F990_00462 | F990_00463 | GCA_000759995_01906 | GCA_000759995_01907 | Unannotated protein. | Unannotated protein. | 0.594 |
F990_00462 | F990_00464 | GCA_000759995_01906 | GCA_000759995_01908 | Unannotated protein. | Unannotated protein; Belongs to the ribF family. | 0.655 |
F990_00462 | F990_00604 | GCA_000759995_01906 | GCA_000759995_02193 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.603 |
F990_00462 | F990_02154 | GCA_000759995_01906 | GCA_000759995_00322 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. | 0.575 |
F990_00462 | F990_02608 | GCA_000759995_01906 | GCA_000759995_01959 | Unannotated protein. | Unannotated protein. | 0.623 |
F990_00462 | F990_02878 | GCA_000759995_01906 | GCA_000759995_01759 | Unannotated protein. | Unannotated protein. | 0.600 |
F990_00462 | ahcY | GCA_000759995_01906 | GCA_000759995_01714 | Unannotated protein. | Unannotated protein; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.935 |
F990_00462 | ppnP | GCA_000759995_01906 | GCA_000759995_02613 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions. | 0.603 |
F990_00462 | rlmN | GCA_000759995_01906 | GCA_000759995_02795 | Unannotated protein. | Unannotated protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family. | 0.605 |
F990_00462 | xpt | GCA_000759995_01906 | GCA_000759995_02755 | Unannotated protein. | Unannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.676 |
F990_00463 | F990_00462 | GCA_000759995_01907 | GCA_000759995_01906 | Unannotated protein. | Unannotated protein. | 0.594 |
F990_00463 | F990_00464 | GCA_000759995_01907 | GCA_000759995_01908 | Unannotated protein. | Unannotated protein; Belongs to the ribF family. | 0.721 |
F990_00464 | F990_00462 | GCA_000759995_01908 | GCA_000759995_01906 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.655 |
F990_00464 | F990_00463 | GCA_000759995_01908 | GCA_000759995_01907 | Unannotated protein; Belongs to the ribF family. | Unannotated protein. | 0.721 |
F990_00604 | F990_00462 | GCA_000759995_02193 | GCA_000759995_01906 | Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Unannotated protein. | 0.603 |
F990_00604 | F990_02154 | GCA_000759995_02193 | GCA_000759995_00322 | Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. | 0.681 |
F990_00604 | F990_02608 | GCA_000759995_02193 | GCA_000759995_01959 | Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Unannotated protein. | 0.734 |
F990_00604 | xpt | GCA_000759995_02193 | GCA_000759995_02755 | Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | Unannotated protein; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. | 0.758 |
F990_02154 | F990_00462 | GCA_000759995_00322 | GCA_000759995_01906 | Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. | Unannotated protein. | 0.575 |
F990_02154 | F990_00604 | GCA_000759995_00322 | GCA_000759995_02193 | Unannotated protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family. | Unannotated protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism. | 0.681 |
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