STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F990_00855Unannotated protein. (443 aa)    
Predicted Functional Partners:
trpA
Unannotated protein; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.
       0.689
accD
Unannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
       0.689
F990_00858
Unannotated protein; Belongs to the folylpolyglutamate synthase family.
       0.689
F990_00340
Unannotated protein.
 
  
 0.623
F990_02087
Unannotated protein.
 
  
 0.445
F990_02372
Unannotated protein.
   
    0.442
F990_03153
Unannotated protein.
   
    0.442
F990_00927
Unannotated protein.
   
    0.442
F990_00859
Unannotated protein.
     
 0.440
F990_01999
Unannotated protein.
   
    0.429
Your Current Organism:
Acinetobacter tjernbergiae
NCBI taxonomy Id: 202955
Other names: A. tjernbergiae, Acinetobacter tjernbergiae Carr et al. 2003, CIP 107465, DSM 14971, strain 7N16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.