STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F990_00862Unannotated protein. (269 aa)    
Predicted Functional Partners:
F990_00861
Unannotated protein.
       0.866
F990_02492
Unannotated protein.
  
    0.676
F990_01986
Unannotated protein.
   
  0.637
F990_03141
Unannotated protein; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.
     
 0.549
F990_02433
Unannotated protein.
   
  0.437
F990_02449
Unannotated protein.
   
  0.437
F990_01488
Unannotated protein.
  
  
  0.421
F990_01964
Unannotated protein.
   
  0.407
F990_03072
Unannotated protein.
 
 
  0.403
ybeY
Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
 
 0.400
Your Current Organism:
Acinetobacter tjernbergiae
NCBI taxonomy Id: 202955
Other names: A. tjernbergiae, Acinetobacter tjernbergiae Carr et al. 2003, CIP 107465, DSM 14971, strain 7N16
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.