Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
F990_00967 | F990_00968 | GCA_000759995_03243 | GCA_000759995_03244 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 0.997 |
F990_00967 | F990_00969 | GCA_000759995_03243 | GCA_000759995_03245 | Unannotated protein. | Unannotated protein. | 0.863 |
F990_00967 | F990_00971 | GCA_000759995_03243 | GCA_000759995_03247 | Unannotated protein. | Unannotated protein. | 0.913 |
F990_00967 | F990_00974 | GCA_000759995_03243 | GCA_000759995_03250 | Unannotated protein. | Unannotated protein. | 0.450 |
F990_00967 | F990_00975 | GCA_000759995_03243 | GCA_000759995_03251 | Unannotated protein. | Unannotated protein. | 0.606 |
F990_00967 | F990_00976 | GCA_000759995_03243 | GCA_000759995_03252 | Unannotated protein. | Unannotated protein. | 0.606 |
F990_00967 | F990_00977 | GCA_000759995_03243 | GCA_000759995_03253 | Unannotated protein. | Unannotated protein. | 0.494 |
F990_00967 | F990_01929 | GCA_000759995_03243 | GCA_000759995_01610 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.419 |
F990_00967 | lptA | GCA_000759995_03243 | GCA_000759995_03246 | Unannotated protein. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.806 |
F990_00967 | tmk | GCA_000759995_03243 | GCA_000759995_03181 | Unannotated protein. | Unannotated protein; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.402 |
F990_00968 | F990_00967 | GCA_000759995_03244 | GCA_000759995_03243 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.997 |
F990_00968 | F990_00969 | GCA_000759995_03244 | GCA_000759995_03245 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.881 |
F990_00968 | F990_00971 | GCA_000759995_03244 | GCA_000759995_03247 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.879 |
F990_00968 | F990_00974 | GCA_000759995_03244 | GCA_000759995_03250 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.450 |
F990_00968 | F990_00975 | GCA_000759995_03244 | GCA_000759995_03251 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.606 |
F990_00968 | F990_00976 | GCA_000759995_03244 | GCA_000759995_03252 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.606 |
F990_00968 | F990_00977 | GCA_000759995_03244 | GCA_000759995_03253 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein. | 0.489 |
F990_00968 | lptA | GCA_000759995_03244 | GCA_000759995_03246 | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | Unannotated protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm. | 0.820 |
F990_00969 | F990_00967 | GCA_000759995_03245 | GCA_000759995_03243 | Unannotated protein. | Unannotated protein. | 0.863 |
F990_00969 | F990_00968 | GCA_000759995_03245 | GCA_000759995_03244 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family. | 0.881 |
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