STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFE44778.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (336 aa)    
Predicted Functional Partners:
OFE44777.1
Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.989
OFE44779.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.987
OFE44780.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.972
OFE44776.1
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.705
OFE44781.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.688
rnhA
DNA polymerase III subunit epsilon; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
       0.609
OFE44783.1
Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.567
OFE44784.1
NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.563
Your Current Organism:
Acinetobacter towneri
NCBI taxonomy Id: 202956
Other names: A. towneri, Acinetobacter towneri Carr et al. 2003, CIP 107472, DSM 14962, strain AB1110
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.