STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFE42432.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (260 aa)    
Predicted Functional Partners:
BJN41_06205
DNA repair protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.692
OFE44165.1
Pilus assembly protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.686
OFE44166.1
Type IV pilus modification protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.671
OFE43882.1
Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.605
OFE44012.1
Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.507
OFE43486.1
TIGR02646 family protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.489
OFE42433.1
Ion channel protein Tsx; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.460
OFE44812.1
TIGR00341 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.405
Your Current Organism:
Acinetobacter towneri
NCBI taxonomy Id: 202956
Other names: A. towneri, Acinetobacter towneri Carr et al. 2003, CIP 107472, DSM 14962, strain AB1110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.