STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BJN41_13485MerR family transcriptional regulator; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (243 aa)    
Predicted Functional Partners:
OFE42597.1
Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.793
OFE42766.1
Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.478
Your Current Organism:
Acinetobacter towneri
NCBI taxonomy Id: 202956
Other names: A. towneri, Acinetobacter towneri Carr et al. 2003, CIP 107472, DSM 14962, strain AB1110
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.