STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cthe_0275PFAM: glycosyltransferase 36; carbohydrate binding; glycosyltransferase 36 associated; KEGG: cce:Ccel_2109 glycosyltransferase 36. (811 aa)    
Predicted Functional Partners:
Cthe_0357
TIGRFAM: alpha-glucan phosphorylase; KEGG: cce:Ccel_2215 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
     
 0.953
bglA
TIGRFAM: beta-galactosidase; KEGG: dtu:Dtur_1799 beta-galactosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
  
 
 0.951
Cthe_2989
PFAM: glycosyltransferase 36; KEGG: tnp:Tnap_0603 glycosyltransferase 36.
 
  
0.945
bglB
PFAM: glycoside hydrolase family 3 domain protein; KEGG: ttr:Tter_0181 glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
 
  
 0.928
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
 0.919
Cthe_1265
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: cce:Ccel_1417 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I.
  
 
 0.913
Cthe_1428
Beta-glucosidase; KEGG: hor:Hore_04820 beta-glucosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.
    
 0.912
Cthe_2183
KEGG: cce:Ccel_3407 UTP-glucose-1-phosphate uridylyltransferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase.
  
 
  0.906
Cthe_2562
TIGRFAM: glucose-1-phosphate cytidylyltransferase; KEGG: cbk:CLL_A2338 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase.
  
 
  0.904
Cthe_3167
KEGG: cce:Ccel_3400 glucose-1-phosphate adenylyltransferase, GlgD subunit; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
   
 
  0.900
Your Current Organism:
Hungateiclostridium thermocellum
NCBI taxonomy Id: 203119
Other names: Clostridium thermocellum ATCC 27405, H. thermocellum ATCC 27405, Hungateiclostridium thermocellum ATCC 27405, Ruminiclostridium thermocellum ATCC 27405
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